Source code for mr_utils.gadgetron.gadgets.rms_coil_combine

# pylint: disable=C0301
'''Example Python Gadget.

Based on [1]_.

References
----------
.. [1] https://github.com/gadgetron/gadgetron/blob/master/gadgets/python/gadgets/rms_coil_combine.py
'''
# pylint: enable=C0301

import numpy as np
try:
    from gadgetron import Gadget  # pylint: disable=E0401
except ModuleNotFoundError:
    Gadget = object

[docs]class RMSCoilCombine(Gadget): '''Gadget that using RMS method to combine coils.'''
[docs] def process_config(self, _cfg): '''Process XML configuration file.''' print("RMS Coil Combine, Config ignored")
[docs] def process(self, h, im): '''Process the data, combine coils.''' combined_image = np.sqrt(np.sum(np.square(np.abs(im)), axis=-1)) print("RMS coil", im.shape, combined_image.shape) h.channels = 1 self.put_next(h, combined_image.astype('complex64')) return 0